Installing GraphBin2

Using Conda

You can install GraphBin2 using the bioconda distribution. You can download Anaconda or Miniconda which contains conda.

# add channels
conda config --add channels defaults
conda config --add channels bioconda
conda config --add channels conda-forge

# create conda environment and install
conda create -n graphbin2 graphbin2

# activate conda environment
conda activate graphbin2

Using pip

You can install GraphBin2 using pip from the PyPI distribution.

# install graphbin2
pip install graphbin2

Test the setup

After installing, run the following command to ensure that GraphBin2 is working.

graphbin2 --help

Now you are ready to run GraphBin2.